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Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.

Barley (Hordeum vulgare L.) is a cereal grass mainly used as animal fodder and raw material for the malting industry. The map-based reference genome sequence of barley cv. â € Morex' was constructed by the International Barley Genome Sequencing Consortium (IBSC) using hierarchical shotgun sequencing. Here, we report the experimental and computational procedures to (i) sequence and assemble more th

A revised family-level classification of the Polyporales (Basidiomycota)

Polyporales is strongly supported as a clade of Agaricomycetes, but the lack of a consensus higher-level classification within the group is a barrier to further taxonomic revision. We amplified nrLSU, nrITS, and rpb1 genes across the Polyporales, with a special focus on the latter. We combined the new sequences with molecular data generated during the PolyPEET project and performed Maximum Likelih

Substantial decline of Northern European peatland bird populations : Consequences of drainage

Northern European peatlands are important habitats for biological conservation because they support rich biodiversity and unique species compositions. However, historical management of peatland habitats has had negative consequences for biodiversity and their degradation remains a major conservation concern. Despite increasing awareness of the conservation value of peatlands, the statuses and ecol

Estimation of high-resolution terrestrial evapotranspiration from Landsat data using a simple Taylor skill fusion method

Estimation of high-resolution terrestrial evapotranspiration (ET) from Landsat data is important in many climatic, hydrologic, and agricultural applications, as it can help bridging the gap between existing coarse-resolution ET products and point-based field measurements. However, there is large uncertainty among existing ET products from Landsat that limit their application. This study presents a

Agricultural land use determines functional genetic diversity of soil microbial communities

Microbial communities play a major role in the degradation of soil organic matter (SOM) in soils. Despite its significance, the functional diversity of the highly diverse microbial communities is poorly understood. To address this, we applied a recently developed technique, captured metagenomics, to determine the effects of land-use on the functional genetic diversity of genes involved in the carb

Biogenic volatile release from permafrost thaw is determined by the soil microbial sink

Warming in the Arctic accelerates thawing of permafrost-affected soils, which leads to a release of greenhouse gases to the atmosphere. We do not know whether permafrost thaw also releases non-methane volatile organic compounds that can contribute to both negative and positive radiative forcing on climate. Here we show using proton transfer reaction–time of flight–mass spectrometry that substantia

Integrating national Red Lists for prioritising conservation actions for European butterflies

Red Lists are very valuable tools in nature conservation at global, continental and (sub-) national scales. In an attempt to prioritise conservation actions for European butterflies, we compiled a database with species lists and Red Lists of all European countries, including the Macaronesian archipelagos (Azores, Madeira and Canary Islands). In total, we compiled national species lists for 42 coun

Dynamic modelling of weathering rates - The benefit over steady-state modelling

Weathering rates are of considerable importance in estimating the acidification sensitivity and recovery capacity of soil and are thus important in the assessment of the sustainability of forestry in a time of changing climate and growing demands for forestry products. In this study, we modelled rates of weathering in mineral soil at two forested sites in southern Sweden included in a monitoring n

Improved characterization of dryland degradation using trends in vegetation/ rainfall sequential linear regression (SERGS-TREND)

Land degradation in drylands has been investigated extensively over recent decades and several remote sensing based techniques attempt to decouple the human influence from the natural climate variability, but are contested in literature. We introduce a novel approach termed SeRGS-TREND that is designed to monitor land degradation by suppressing the impact from climate variability and highlight veg

A Continental-Scale Validation of Ecosystem Service Models

Faced with environmental degradation, governments worldwide are developing policies to safeguard ecosystem services (ES). Many ES models exist to support these policies, but they are generally poorly validated, especially at large scales, which undermines their credibility. To address this gap, we describe a study of multiple models of five ES, which we validate at an unprecedented scale against 1

A comprehensive molecular phylogeny of Geometridae (Lepidoptera) with a focus on enigmatic small subfamilies

Our study aims to investigate the relationships of the major lineages within the moth family Geometridae, with a focus on the poorly studied Oenochrominae- Desmobathrinae complex, and to translate some of the results into a coherent subfamilial and tribal level classification for the family. We analyzed a molecular dataset of 1,206 Geometroidea terminal taxa from all biogeographical regions compri

Effects of whole-tree harvesting on soil, soil water and tree growth – A dynamic modelling exercise in four long-term experiments

Whole tree harvesting (WTH) following final felling of productive forests is increasingly promoted as a method to extract biomass for energy purposes. Despite its importance, there is a limited number of experimental studies investigating the impacts of WTH on forest ecosystem sustainability. Modelling studies have previously been carried out to complement and explain empirical observations from f

Population responses of bird populations to climate change on two continents vary with species’ ecological traits but not with direction of change in climate suitability

Climate change is a major global threat to biodiversity with widespread impacts on ecological communities. Evidence for beneficial impacts on populations is perceived to be stronger and more plentiful than that for negative impacts, but few studies have investigated this apparent disparity, or how ecological factors affect population responses to climatic change. We examined the strength of the re

Climate effects on the onset of flowering in the United Kingdom

Background: A warmer climate has consequences for the timing of phenological events, as temperature is a key factor controlling plant development and flowering. In this study, we analyse the effects of the long-term climate change and an extreme weather event on the first flowering day (FFD) of five spring-flowering wild plant species in the United Kingdom. Citizen science data from the UK Woodlan

Cucurbits as a model system for crop pollination management

Cucurbit crops have steadily increased in production over the last 50 years, particularly in Asia where pioneering technological advancements and genetic improvements have created new hybrid varieties. Generally, cucurbits are dependent on insect-pollination for fruit set and are popular species for pollination studies. This review systematically summarises pollination research conducted in the ma

Oil crops for the future

Agriculture faces enormous challenges including the need to substantially increase productivity, reduce environmental footprint, and deliver renewable alternatives that are being addressed by developing new oil crops for the future. The efforts include domestication of Lepidium spp. using genomics-aided breeding as a cold hardy perennial high-yielding oil crop that provides substantial environment

Violent Climate Imaginaries: Science-Fiction-Politics

There are many ways in which climate futures can be envisioned, such asglobal and regional climate models, scenarios of future emission trajectories, orpathways and visions of societal transformation. All these anticipatory practicesaim to make the climatic future knowable in the present. In so doing, they quiteoften envision a climatic future that is inherently violent: a future marked bydisaster